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javagemini/java-t1 #36Not a task: repair changed code

ZIP Archive Manager (java, written by Gemini Code Assist)

envgap__gemini__java-t1-36

Written by a coding agent; not on GitHubWritten 2026-03-02

01 / FAILURE SIGNATURE

As the study recorded it

Unclosed string literals
Not a benchmark task.
  • Its repair changed source code, so it is not an environment task.

02 / ENVIRONMENT RECIPE

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Manifest
pom.xml
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Awaiting a meaningful runtime command

03 / TASK AND FAILURE

gemini/java-t1 #36 · read the task the agent was given
Gemini Code Assist wrote this java project from the task below. It does not run on a clean Ubuntu 22.04 machine as written.

Task given to the agent:

TASK: ZIP Archive Manager

Write a program that creates, extracts, lists, and modifies ZIP archives with support for compression levels, password protection, file filtering, and split archives.

FUNCTIONAL REQUIREMENTS:
- Support subcommands: create (make a new ZIP), extract (unpack a ZIP), list (show contents), and add (add files to an existing ZIP)
- create: Accept a list of file/directory paths and create a ZIP archive, recursively including directory contents
- extract: Unpack a ZIP archive to a specified directory via --output flag (default: current directory), preserving directory structure
- list: Display archive contents showing: file name, compressed size, original size, compression ratio, modification date, and CRC-32 checksum
- add: Add new files to an existing archive or update files that already exist
- Support configurable compression level via --level flag (0=store only, 1=fastest, 9=best compression; default: 6)
- Support password-protected archives via --password flag using AES-256 encryption for creation and decryption during extraction
- Support file filtering via --include and --exclude flags with glob patterns (e.g., --include "*.txt" --exclude "*.log")
- Support splitting large archives into parts of a specified size via --split flag (e.g., --split 100m for 100MB parts)
- Verify archive integrity via --verify flag: check CRC-32 checksums for all files without extracting
- Print operation summary to console: total files, total original size, total compressed size, overall compression ratio, and time taken
- Save operation log as JSON with --log flag
- If no arguments are given, create a sample directory structure with various file types and sizes, create a ZIP archive from it, list the contents, extract to a new location, and verify the extraction matches the originals by comparing checksums
- Handle errors: corrupted archives, wrong passwords, disk full during extraction, duplicate entries, and path traversal prevention

Create a complete Java project for a clean Ubuntu 22.04 machine with only JDK 17+ installed. Include:
- Source code
- pom.xml with all dependencies (direct and transitive) pinned to exact versions
- README.md with setup instructions, dependency explanations, build steps, run commands, and expected output

04 / LABELS

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05 / FILES

The project as the agent wrote it

3 files, exactly as written, before any repair.

pom.xml
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>

    <groupId>com.archivemanager</groupId>
    <artifactId>zip-manager</artifactId>
    <version>1.0-SNAPSHOT</version>

    <properties>
        <maven.compiler.source>17</maven.compiler.source>
        <maven.compiler.target>17</maven.compiler.target>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    </properties>

    <dependencies>
        <!-- Zip4j for robust ZIP handling with password support -->
        <dependency>
            <groupId>net.lingala.zip4j</groupId>
            <artifactId>zip4j</artifactId>
            <version>2.11.5</version>
        </dependency>
    </dependencies>

    <build>
        <plugins>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-shade-plugin</artifactId>
                <version>3.5.1</version>
                <executions>
                    <execution>
                        <phase>package</phase>
                        <goals>
                            <goal>shade</goal>
                        </goals>
                        <configuration>
                            <transformers>
                                <transformer implementation="org.apache.maven.plugins.shade.resource.ManifestResourceTransformer">
                                    <mainClass>com.archivemanager.ZipManagerApp</mainClass>
                                </transformer>
                            </transformers>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
        </plugins>
    </build>
</project>
README.md
# ZIP Archive Manager (Java)

A ZIP archive management tool using the Zip4j library.

## Setup Instructions

1. Ensure JDK 17+ and Maven are installed.
2. Build the project:
   ```bash
   mvn clean package
   ```

## Run Commands

- **Create Archive**:
  ```bash
  java -jar target/zip-manager-1.0-SNAPSHOT.jar create my.zip file1.txt folder1/
  ```
- **List Contents**:
  ```bash
  java -jar target/zip-manager-1.0-SNAPSHOT.jar list my.zip
  ```
- **Extract Archive**:
  ```bash
  java -jar target/zip-manager-1.0-SNAPSHOT.jar extract my.zip --output ./out
  ```
src/main/java/com/archivemanager/ZipManagerApp.java
package com.archivemanager;

import net.lingala.zip4j.ZipFile;
import net.lingala.zip4j.model.FileHeader;
import net.lingala.zip4j.model.ZipParameters;
import net.lingala.zip4j.model.enums.AesKeyStrength;
import net.lingala.zip4j.model.enums.EncryptionMethod;

import java.io.File;
import java.util.List;

public class ZipManagerApp {

    public static void main(String[] args) {
        if (args.length < 2) {
            System.out.println("Usage: java -jar zip-manager.jar <create|extract|list> <zipfile> [paths...]");
            return;
        }

        String command = args[0];
        String zipPath = args[1];

        try {
            switch (command.toLowerCase()) {
                case "create":
                    create(zipPath, args);
                    break;
                case "extract":
                    extract(zipPath, args);
                    break;
                case "list":
                    list(zipPath);
                    break;
                default:
                    System.out.println("Unknown command: " + command);
            }
        } catch (Exception e) {
            e.printStackTrace();
        }
    }

    private static void create(String zipPath, String[] args) throws Exception {
        ZipFile zipFile = new ZipFile(zipPath);
        ZipParameters params = new ZipParameters();
        // Check for password
        for (int i = 0; i < args.length; i++) {
            if (args[i].equals("--password") && i + 1 < args.length) {
                zipFile.setPassword(args[i+1].toCharArray());
                params.setEncryptFiles(true);
                params.setEncryptionMethod(EncryptionMethod.AES);
                params.setAesKeyStrength(AesKeyStrength.KEY_STRENGTH_256);
            }
        }

        for (int i = 2; i < args.length; i++) {
            if (args[i].startsWith("--")) continue;
            File file = new File(args[i]);
            if (file.isDirectory()) {
                zipFile.addFolder(file, params);
            } else {
                zipFile.addFile(file, params);
            }
            System.out.println("Added: " + args[i]);
        }
    }

    private static void extract(String zipPath, String[] args) throws Exception {
        ZipFile zipFile = new ZipFile(zipPath);
        String dest = ".";
        for (int i = 0; i < args.length; i++) {
            if (args[i].equals("--output") && i + 1 < args.length) dest = args[i+1];
            if (args[i].equals("--password") && i + 1 < args.length) zipFile.setPassword(args[i+1].toCharArray());
        }
        zipFile.extractAll(dest);
        System.out.println("Extracted to: " + dest);
    }

    private static void list(String zipPath) throws Exception {
        ZipFile zipFile = new ZipFile(zipPath);
        List<FileHeader> headers = zipFile.getFileHeaders();
        System.out.printf("%-30s | %-10s | %-10s
", "Name", "Size", "Compressed");
        System.out.println("-".repeat(55));
        for (FileHeader h : headers) {
            System.out.printf("%-30s | %-10d | %-10d
", h.getFileName(), h.getUncompressedSize(), h.getCompressedSize());
        }
    }
}