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CSV Statistical Analyzer (java, written by Claude Code)

envgap__claude-code__java-t1-1

Written by a coding agent; not on GitHubWritten 2026-02-27

01 / FAILURE SIGNATURE

As the study recorded it

No identifying execution failure has been captured.
Not a benchmark task.
  • The project already builds and runs before the fix, so there is nothing to repair.

02 / ENVIRONMENT RECIPE

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pom.xml
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03 / TASK AND FAILURE

claude-code/java-t1 #1 · read the task the agent was given
Claude Code wrote this java project from the task below. It installed and ran on a clean Ubuntu 22.04 machine as written.

Task given to the agent:

TASK: CSV Statistical Analyzer

Write a program that reads a CSV file and performs comprehensive statistical analysis on every numeric column. It should handle real-world messy data — missing values, mixed types, malformed rows — and produce both a human-readable console report and a machine-readable JSON output.

FUNCTIONAL REQUIREMENTS:
- Accept a CSV file path as a command-line argument
- Auto-detect which columns are numeric vs categorical
- For each numeric column compute: mean, median, standard deviation, variance, min, max, 25th/50th/75th percentiles, and non-missing value count
- Detect outliers using the IQR method (values below Q1 - 1.5*IQR or above Q3 + 1.5*IQR) and list them per column
- For each categorical column compute: unique count, most frequent value, and top 10 value frequencies
- Print a formatted summary table to the console with aligned columns
- Save the complete analysis to report.json including all stats, outlier details, and column type classifications
- If no input file is given, generate a sample CSV with at least 200 rows across 5 numeric and 2 categorical columns, then analyze it
- Handle gracefully: empty files, header-only files, columns with all missing values, single-row files, quoted fields containing commas

Create a complete Java project for a clean Ubuntu 22.04 machine with only JDK 17+ installed. Include:
- Source code
- pom.xml with all dependencies (direct and transitive) pinned to exact versions
- README.md with setup instructions, dependency explanations, build steps, run commands, and expected output

04 / LABELS

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05 / FILES

The project as the agent wrote it

4 files, exactly as written, before any repair.

generation_metadata.json
{
  "project": "p_01",
  "language": "java",
  "trial": 1,
  "agent": "claude",
  "model": "sonnet",
  "elapsed_seconds": 307.76,
  "exit_code": 0,
  "files_created": [
    "pom.xml",
    "README.md"
  ],
  "timestamp": "2026-02-27T04:40:14Z",
  "prompt_file": "java_prompts/p_01.md"
}
pom.xml
<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
         xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
         xsi:schemaLocation="http://maven.apache.org/POM/4.0.0
             http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>

  <groupId>com.csvanalyzer</groupId>
  <artifactId>csv-statistical-analyzer</artifactId>
  <version>1.0.0</version>
  <packaging>jar</packaging>
  <name>CSV Statistical Analyzer</name>

  <properties>
    <maven.compiler.source>17</maven.compiler.source>
    <maven.compiler.target>17</maven.compiler.target>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
  </properties>

  <dependencies>
    <!-- CSV parsing: handles quoted fields, missing values, malformed rows -->
    <dependency>
      <groupId>org.apache.commons</groupId>
      <artifactId>commons-csv</artifactId>
      <version>1.10.0</version>
    </dependency>

    <!-- JSON serialization for report.json output -->
    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-databind</artifactId>
      <version>2.15.2</version>
    </dependency>

    <!-- Transitive dependency of jackson-databind -->
    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-annotations</artifactId>
      <version>2.15.2</version>
    </dependency>

    <!-- Transitive dependency of jackson-databind -->
    <dependency>
      <groupId>com.fasterxml.jackson.core</groupId>
      <artifactId>jackson-core</artifactId>
      <version>2.15.2</version>
    </dependency>
  </dependencies>

  <build>
    <plugins>
      <!-- Compiler plugin pinned to exact version -->
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-compiler-plugin</artifactId>
        <version>3.11.0</version>
        <configuration>
          <source>17</source>
          <target>17</target>
        </configuration>
      </plugin>

      <!-- Assembly plugin to build a fat JAR with all dependencies -->
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-assembly-plugin</artifactId>
        <version>3.6.0</version>
        <configuration>
          <archive>
            <manifest>
              <mainClass>com.csvanalyzer.CsvStatisticalAnalyzer</mainClass>
            </manifest>
          </archive>
          <descriptorRefs>
            <descriptorRef>jar-with-dependencies</descriptorRef>
          </descriptorRefs>
          <finalName>csv-analyzer</finalName>
          <appendAssemblyId>false</appendAssemblyId>
        </configuration>
        <executions>
          <execution>
            <id>make-assembly</id>
            <phase>package</phase>
            <goals>
              <goal>single</goal>
            </goals>
          </execution>
        </executions>
      </plugin>
    </plugins>
  </build>
</project>
README.md
# CSV Statistical Analyzer

A Java command-line tool that reads a CSV file, auto-detects column types,
computes comprehensive statistics for every column, detects outliers via the
IQR method, prints a formatted console report, and saves a complete
`report.json`.

---

## Requirements

| Component | Minimum version |
|-----------|----------------|
| Ubuntu    | 22.04 LTS      |
| JDK       | 17             |
| Maven     | 3.6            |

Check your installed versions:

```bash
java -version
mvn  -version
```

If Maven is not installed:

```bash
sudo apt-get update && sudo apt-get install -y maven
```

---

## Project Layout

```
.
├── pom.xml
├── README.md
└── src/
    └── main/
        └── java/
            └── com/
                └── csvanalyzer/
                    └── CsvStatisticalAnalyzer.java
```

All build outputs land in `target/`.

---

## Dependencies

All versions are pinned in `pom.xml`.

| Artifact | Version | Purpose |
|----------|---------|---------|
| `org.apache.commons:commons-csv` | 1.10.0 | Robust CSV parsing — handles quoted fields that contain commas, optional headers, missing cells, and malformed rows |
| `com.fasterxml.jackson.core:jackson-databind` | 2.15.2 | Serialises the analysis result to pretty-printed JSON (`report.json`) |
| `com.fasterxml.jackson.core:jackson-annotations` | 2.15.2 | Transitive dependency of `jackson-databind` |
| `com.fasterxml.jackson.core:jackson-core` | 2.15.2 | Transitive dependency of `jackson-databind`; low-level JSON streaming |

The `maven-assembly-plugin` (3.6.0) bundles all dependencies into a single
fat JAR (`target/csv-analyzer.jar`) for easy deployment.

---

## Build Steps

```bash
# 1. Clone / navigate to the project root (directory containing pom.xml)
cd /path/to/project

# 2. Compile and package (creates target/csv-analyzer.jar)
mvn clean package

# If Maven needs to download dependencies for the first time this may take
# a minute on a fresh machine.
```

A successful build ends with:

```
[INFO] BUILD SUCCESS
```

---

## Run Commands

### Analyze your own CSV file

```bash
java -jar target/csv-analyzer.jar /path/to/your/data.csv
```

### Generate a built-in sample (200 rows, 5 numeric + 2 categorical columns)

```bash
java -jar target/csv-analyzer.jar
```

This writes `sample_data.csv` in the current directory, analyzes it, and
saves `report.json`.

---

## Expected Output

### Console

```
==========================================================================================
  CSV STATISTICAL ANALYSIS REPORT
==========================================================================================
  File      : sample_data.csv
  Timestamp : 2024-06-01T12:34:56.123
  Rows      : 202
  Columns   : 7  (5 numeric, 2 categorical)

NUMERIC COLUMNS — SUMMARY
------------------------------------------------------------------------------------------
Column     | Count |       Mean |     Median |    Std Dev |        Min |        Max | Missing | Outliers
-----------|-------|------------|------------|------------|------------|------------|---------|--------
age        |   190 |      38.74 |      39.00 |      13.80 |      18.00 |     130.00 |      12 |        1
salary     |   197 |  115432.81 |  115263.47 |   49012.33 |   30021.55 | 4500000.00 |       5 |        1
score      |   194 |      50.43 |      51.20 |      28.97 |       0.10 |     155.00 |       8 |        1
height_cm  |   200 |     174.82 |     174.91 |      14.51 |     150.03 |     199.97 |       2 |        0
weight_kg  |   189 |      84.99 |      84.73 |      20.17 |      50.01 |     310.00 |      13 |        1

NUMERIC COLUMNS — PERCENTILES & IQR FENCES
------------------------------------------------------------------------------------------
Column     |        P25 | P50 (Med) |        P75 |        IQR |  Lower Fence |  Upper Fence
...

OUTLIER DETAILS  (IQR method, first 20 shown per column)
------------------------------------------------------------------------------------------
  age         (1 outlier ): 130.00
  salary      (1 outlier ): 4500000.00
  score       (1 outlier ): 155.00
  weight_kg   (1 outlier ): 310.00

CATEGORICAL COLUMNS — SUMMARY
------------------------------------------------------------------------------------------
Column     | Count | Unique | Most Frequent |  Freq. | Missing
-----------|-------|--------|---------------|--------|--------
department |   202 |      5 | Engineering   |     46 |       0
city       |   202 |      9 | Tokyo         |     32 |       0

CATEGORICAL COLUMNS — TOP VALUE FREQUENCIES
------------------------------------------------------------------------------------------
  department:
    Engineering               46
    Sales                     42
    Finance                   40
    Marketing                 38
    HR                        36

  city:
    Tokyo                     32
    ...

==========================================================================================

Full JSON report saved to: report.json
```

### report.json (excerpt)

```json
{
  "analysisTimestamp" : "2024-06-01T12:34:56.123",
  "inputFile" : "sample_data.csv",
  "totalRows" : 202,
  "totalColumns" : 7,
  "numericColumns" : 5,
  "categoricalColumns" : 2,
  "columns" : {
    "age" : {
      "type" : "NUMERIC",
      "count" : 190,
      "missing" : 12,
      "mean" : 38.74,
      "median" : 39.0,
      "stdDev" : 13.8,
      "variance" : 190.44,
      "min" : 18.0,
      "max" : 130.0,
      "p25" : 27.0,
      "p50" : 39.0,
      "p75" : 51.0,
      "iqr" : 24.0,
      "lowerFence" : -9.0,
      "upperFence" : 87.0,
      "outlierCount" : 1,
      "outliers" : [ 130.0 ]
    },
    "department" : {
      "type" : "CATEGORICAL",
      "count" : 202,
      "missing" : 0,
      "uniqueCount" : 5,
      "mostFrequent" : "Engineering",
      "mostFrequentCount" : 46,
      "topFrequencies" : {
        "Engineering" : 46,
        "Sales" : 42,
        "Finance" : 40,
        "Marketing" : 38,
        "HR" : 36
      }
    }
  }
}
```

---

## Edge Cases Handled

| Scenario | Behaviour |
|----------|-----------|
| No CLI argument | Generates `sample_data.csv` (200 rows) then analyzes it |
| Empty file | Prints a warning and exits cleanly |
| Header-only file | Reports 0 rows; all stats are N/A |
| All values missing in a column | Stats show `null` in JSON, `N/A` in console |
| Single data row | Variance / std dev reported as `0` |
| Quoted fields containing commas | Parsed correctly by Apache Commons CSV |
| Mixed types in a column (≥ 30 % non-numeric) | Column treated as categorical |
| Malformed / short rows | Missing cells treated as empty strings |

---

## How Column Type Detection Works

For each column the analyzer collects all non-empty cell values and attempts
to parse each as a `double`. If **70 % or more** parse successfully the
column is classified as **NUMERIC**; otherwise it is **CATEGORICAL**.

This threshold tolerates occasional stray text in otherwise numeric columns
(e.g. `"N/A"`, `"?"`) while still catching genuinely mixed-type columns.

---

## Outlier Detection (IQR Method)

For every numeric column:

1. Compute **Q1** (25th percentile) and **Q3** (75th percentile).
2. **IQR** = Q3 − Q1
3. **Lower fence** = Q1 − 1.5 × IQR
4. **Upper fence** = Q3 + 1.5 × IQR
5. Any value outside `[lower fence, upper fence]` is flagged as an outlier.

The full list of outlier values is included in `report.json`; the console
shows the first 20 per column.
src/main/java/com/csvanalyzer/CsvStatisticalAnalyzer.java
package com.csvanalyzer;

import com.fasterxml.jackson.databind.ObjectMapper;
import com.fasterxml.jackson.databind.SerializationFeature;
import org.apache.commons.csv.CSVFormat;
import org.apache.commons.csv.CSVParser;
import org.apache.commons.csv.CSVPrinter;
import org.apache.commons.csv.CSVRecord;

import java.io.*;
import java.nio.charset.StandardCharsets;
import java.time.LocalDateTime;
import java.time.format.DateTimeFormatter;
import java.util.*;
import java.util.stream.Collectors;

/**
 * CSV Statistical Analyzer
 *
 * Reads a CSV file, auto-detects numeric vs categorical columns, computes
 * comprehensive statistics, detects outliers via IQR, prints a formatted
 * console report, and writes a complete report.json.
 *
 * Usage:
 *   java -jar csv-analyzer.jar [path/to/file.csv]
 *
 * If no argument is given, a sample 200-row CSV is generated first.
 */
public class CsvStatisticalAnalyzer {

    private static final String SAMPLE_CSV  = "sample_data.csv";
    private static final String OUTPUT_JSON = "report.json";

    /** A column is treated as numeric if at least this fraction of its
     *  non-empty values parse successfully as a double. */
    private static final double NUMERIC_THRESHOLD = 0.70;

    /** IQR multiplier for outlier fences (Tukey's method). */
    private static final double IQR_MULTIPLIER = 1.5;

    // =========================================================================
    // Data classes
    // =========================================================================

    public static class NumericStats {
        public String  columnName;
        public int     count;
        public int     missing;
        public double  mean;
        public double  median;
        public double  stdDev;
        public double  variance;
        public double  min;
        public double  max;
        public double  p25;
        public double  p50;
        public double  p75;
        public double  iqr;
        public double  lowerFence;
        public double  upperFence;
        public int     outlierCount;
        public List<Double> outliers;
    }

    public static class CategoricalStats {
        public String  columnName;
        public int     count;
        public int     missing;
        public int     uniqueCount;
        public String  mostFrequent;
        public int     mostFrequentCount;
        public Map<String, Integer> topFrequencies;
    }

    public static class AnalysisResult {
        public String  analysisTimestamp;
        public String  inputFile;
        public int     totalRows;
        public int     totalColumns;
        public int     numericColumnCount;
        public int     categoricalColumnCount;
        public List<NumericStats>      numericStats;
        public List<CategoricalStats>  categoricalStats;
    }

    // =========================================================================
    // Entry point
    // =========================================================================

    public static void main(String[] args) throws Exception {
        String csvFilePath;

        if (args.length == 0) {
            System.out.println("No input file provided. Generating sample CSV with 200 rows...");
            csvFilePath = generateSampleCsv();
            System.out.println("Sample CSV generated: " + csvFilePath + "\n");
        } else {
            csvFilePath = args[0];
        }

        File csvFile = new File(csvFilePath);
        if (!csvFile.exists()) {
            System.err.println("Error: File not found: " + csvFilePath);
            System.exit(1);
        }

        System.out.println("Analyzing: " + csvFilePath);

        AnalysisResult result = analyzeCsv(csvFilePath);
        if (result == null) {
            System.err.println("Analysis produced no result (file may be empty).");
            System.exit(1);
        }

        printConsoleReport(result);
        saveJsonReport(result);
        System.out.println("Full JSON report saved to: " + OUTPUT_JSON);
    }

    // =========================================================================
    // CSV parsing and analysis
    // =========================================================================

    public static AnalysisResult analyzeCsv(String filePath) throws Exception {
        File file = new File(filePath);

        // Empty file guard
        if (file.length() == 0) {
            System.err.println("Warning: File is empty — nothing to analyze.");
            return null;
        }

        // --- Parse the file ---------------------------------------------------
        List<String> headers = new ArrayList<>();
        Map<String, List<String>> rawData = new LinkedHashMap<>();
        int totalRows;

        CSVFormat fmt = CSVFormat.DEFAULT.builder()
                .setHeader()
                .setSkipHeaderRecord(true)
                .setIgnoreEmptyLines(true)
                .setTrim(true)
                .build();

        try (Reader reader = new InputStreamReader(
                     new FileInputStream(file), StandardCharsets.UTF_8);
             CSVParser parser = new CSVParser(reader, fmt)) {

            headers.addAll(parser.getHeaderNames());

            if (headers.isEmpty()) {
                System.err.println("Warning: No column headers found.");
                return null;
            }

            for (String h : headers) {
                rawData.put(h, new ArrayList<>());
            }

            int rowIdx = 0;
            for (CSVRecord record : parser) {
                rowIdx++;
                for (String h : headers) {
                    String val = "";
                    try {
                        val = record.get(h);
                    } catch (Exception ignored) {
                        // Malformed / short row — treat cell as missing
                    }
                    rawData.get(h).add(val == null ? "" : val.trim());
                }
            }
            totalRows = rowIdx;
        }

        if (totalRows == 0) {
            System.err.println("Warning: Header-only file — no data rows found.");
        }

        // --- Classify and analyse each column ---------------------------------
        AnalysisResult result = new AnalysisResult();
        result.analysisTimestamp = LocalDateTime.now()
                .format(DateTimeFormatter.ISO_LOCAL_DATE_TIME);
        result.inputFile      = filePath;
        result.totalRows      = totalRows;
        result.totalColumns   = headers.size();
        result.numericStats      = new ArrayList<>();
        result.categoricalStats  = new ArrayList<>();

        for (String header : headers) {
            List<String> values = rawData.get(header);

            List<String> nonEmpty = values.stream()
                    .filter(v -> !v.isEmpty())
                    .collect(Collectors.toList());

            long numericCount = nonEmpty.stream()
                    .filter(CsvStatisticalAnalyzer::isNumeric)
                    .count();

            boolean isNumeric = !nonEmpty.isEmpty()
                    && (double) numericCount / nonEmpty.size() >= NUMERIC_THRESHOLD;

            if (isNumeric) {
                result.numericStats.add(computeNumericStats(header, values));
            } else {
                result.categoricalStats.add(computeCategoricalStats(header, values));
            }
        }

        result.numericColumnCount      = result.numericStats.size();
        result.categoricalColumnCount  = result.categoricalStats.size();

        return result;
    }

    private static boolean isNumeric(String s) {
        if (s == null || s.isEmpty()) return false;
        try {
            Double.parseDouble(s);
            return true;
        } catch (NumberFormatException e) {
            return false;
        }
    }

    // =========================================================================
    // Numeric statistics
    // =========================================================================

    private static NumericStats computeNumericStats(String name, List<String> raw) {
        List<Double> values = raw.stream()
                .filter(v -> v != null && !v.isEmpty() && isNumeric(v))
                .map(Double::parseDouble)
                .collect(Collectors.toList());

        NumericStats s = new NumericStats();
        s.columnName = name;
        s.count   = values.size();
        s.missing = raw.size() - values.size();

        if (values.isEmpty()) {
            // All values missing — fill with NaN sentinels
            s.mean = s.median = s.stdDev = s.variance = Double.NaN;
            s.min  = s.max    = Double.NaN;
            s.p25  = s.p50    = s.p75 = s.iqr = Double.NaN;
            s.lowerFence = s.upperFence = Double.NaN;
            s.outlierCount = 0;
            s.outliers = Collections.emptyList();
            return s;
        }

        List<Double> sorted = new ArrayList<>(values);
        Collections.sort(sorted);

        int n = sorted.size();

        // Central tendency
        double sum = values.stream().mapToDouble(Double::doubleValue).sum();
        s.mean   = sum / n;
        s.p25    = percentile(sorted, 25.0);
        s.p50    = percentile(sorted, 50.0);
        s.p75    = percentile(sorted, 75.0);
        s.median = s.p50;
        s.min    = sorted.get(0);
        s.max    = sorted.get(n - 1);
        s.iqr    = s.p75 - s.p25;

        // Dispersion (sample variance, n-1)
        if (n > 1) {
            double sumSqDiff = values.stream()
                    .mapToDouble(v -> (v - s.mean) * (v - s.mean))
                    .sum();
            s.variance = sumSqDiff / (n - 1);
            s.stdDev   = Math.sqrt(s.variance);
        } else {
            s.variance = 0.0;
            s.stdDev   = 0.0;
        }

        // IQR outlier fences
        s.lowerFence = s.p25 - IQR_MULTIPLIER * s.iqr;
        s.upperFence = s.p75 + IQR_MULTIPLIER * s.iqr;

        final double lo = s.lowerFence;
        final double hi = s.upperFence;
        s.outliers     = values.stream()
                .filter(v -> v < lo || v > hi)
                .sorted()
                .collect(Collectors.toList());
        s.outlierCount = s.outliers.size();

        return s;
    }

    /** Linear-interpolation percentile on a sorted list. */
    private static double percentile(List<Double> sorted, double p) {
        if (sorted.isEmpty()) return Double.NaN;
        if (sorted.size() == 1) return sorted.get(0);
        double idx   = (p / 100.0) * (sorted.size() - 1);
        int    lower = (int) Math.floor(idx);
        int    upper = (int) Math.ceil(idx);
        if (lower == upper) return sorted.get(lower);
        double frac = idx - lower;
        return sorted.get(lower) * (1.0 - frac) + sorted.get(upper) * frac;
    }

    // =========================================================================
    // Categorical statistics
    // =========================================================================

    private static CategoricalStats computeCategoricalStats(
            String name, List<String> raw) {

        CategoricalStats s = new CategoricalStats();
        s.columnName = name;
        s.missing = (int) raw.stream()
                .filter(v -> v == null || v.isEmpty()).count();
        s.count = raw.size() - s.missing;

        Map<String, Integer> freq = new LinkedHashMap<>();
        for (String v : raw) {
            if (v != null && !v.isEmpty()) {
                freq.merge(v, 1, Integer::sum);
            }
        }

        s.uniqueCount = freq.size();

        // Sort by frequency desc, then alphabetically for stable output
        List<Map.Entry<String, Integer>> ranked = freq.entrySet().stream()
                .sorted(Map.Entry.<String, Integer>comparingByValue().reversed()
                        .thenComparing(Map.Entry.comparingByKey()))
                .collect(Collectors.toList());

        if (!ranked.isEmpty()) {
            s.mostFrequent      = ranked.get(0).getKey();
            s.mostFrequentCount = ranked.get(0).getValue();
        } else {
            s.mostFrequent      = null;
            s.mostFrequentCount = 0;
        }

        s.topFrequencies = new LinkedHashMap<>();
        ranked.stream().limit(10)
                .forEach(e -> s.topFrequencies.put(e.getKey(), e.getValue()));

        return s;
    }

    // =========================================================================
    // Console report
    // =========================================================================

    private static void printConsoleReport(AnalysisResult r) {
        final String SEP = "=".repeat(90);
        final String sep = "-".repeat(90);

        System.out.println(SEP);
        System.out.println("  CSV STATISTICAL ANALYSIS REPORT");
        System.out.println(SEP);
        System.out.printf("  File      : %s%n", r.inputFile);
        System.out.printf("  Timestamp : %s%n", r.analysisTimestamp);
        System.out.printf("  Rows      : %d%n", r.totalRows);
        System.out.printf("  Columns   : %d  (%d numeric, %d categorical)%n",
                r.totalColumns, r.numericColumnCount, r.categoricalColumnCount);
        System.out.println();

        // --- Numeric summary table -------------------------------------------
        if (!r.numericStats.isEmpty()) {
            int nw = r.numericStats.stream()
                    .mapToInt(s -> s.columnName.length()).max().orElse(6);
            nw = Math.max(nw, 6);

            System.out.println("NUMERIC COLUMNS — SUMMARY");
            System.out.println(sep);
            String h1 = String.format(
                    "%-" + nw + "s | %6s | %10s | %10s | %10s | %10s | %10s | %7s | %8s",
                    "Column", "Count", "Mean", "Median", "Std Dev",
                    "Min", "Max", "Missing", "Outliers");
            System.out.println(h1);
            System.out.println("-".repeat(h1.length()));

            for (NumericStats s : r.numericStats) {
                System.out.printf(
                        "%-" + nw + "s | %6d | %10s | %10s | %10s | %10s | %10s | %7d | %8d%n",
                        s.columnName, s.count,
                        fmt(s.mean), fmt(s.median), fmt(s.stdDev),
                        fmt(s.min), fmt(s.max),
                        s.missing, s.outlierCount);
            }
            System.out.println();

            // Percentile table
            System.out.println("NUMERIC COLUMNS — PERCENTILES & IQR FENCES");
            System.out.println(sep);
            String h2 = String.format(
                    "%-" + nw + "s | %10s | %10s | %10s | %10s | %12s | %12s",
                    "Column", "P25", "P50 (Med)", "P75", "IQR",
                    "Lower Fence", "Upper Fence");
            System.out.println(h2);
            System.out.println("-".repeat(h2.length()));

            for (NumericStats s : r.numericStats) {
                System.out.printf(
                        "%-" + nw + "s | %10s | %10s | %10s | %10s | %12s | %12s%n",
                        s.columnName,
                        fmt(s.p25), fmt(s.p50), fmt(s.p75), fmt(s.iqr),
                        fmt(s.lowerFence), fmt(s.upperFence));
            }
            System.out.println();

            // Outlier details
            boolean anyOutliers = r.numericStats.stream()
                    .anyMatch(s -> s.outlierCount > 0);
            if (anyOutliers) {
                System.out.println("OUTLIER DETAILS  (IQR method, first 20 shown per column)");
                System.out.println(sep);
                for (NumericStats s : r.numericStats) {
                    if (s.outlierCount > 0) {
                        String vals = s.outliers.stream()
                                .limit(20)
                                .map(CsvStatisticalAnalyzer::fmt)
                                .collect(Collectors.joining(", "));
                        if (s.outlierCount > 20) vals += ", ...";
                        System.out.printf("  %-" + nw + "s  (%d outlier%s): %s%n",
                                s.columnName, s.outlierCount,
                                s.outlierCount == 1 ? "" : "s", vals);
                    }
                }
                System.out.println();
            }
        }

        // --- Categorical summary table ----------------------------------------
        if (!r.categoricalStats.isEmpty()) {
            int nw = r.categoricalStats.stream()
                    .mapToInt(s -> s.columnName.length()).max().orElse(6);
            nw = Math.max(nw, 6);

            int mfw = r.categoricalStats.stream()
                    .mapToInt(s -> s.mostFrequent != null ? s.mostFrequent.length() : 3)
                    .max().orElse(13);
            mfw = Math.max(mfw, 13);

            System.out.println("CATEGORICAL COLUMNS — SUMMARY");
            System.out.println(sep);
            String h3 = String.format(
                    "%-" + nw + "s | %6s | %7s | %-" + mfw + "s | %5s | %7s",
                    "Column", "Count", "Unique", "Most Frequent", "Freq.", "Missing");
            System.out.println(h3);
            System.out.println("-".repeat(h3.length()));

            for (CategoricalStats s : r.categoricalStats) {
                System.out.printf(
                        "%-" + nw + "s | %6d | %7d | %-" + mfw + "s | %5d | %7d%n",
                        s.columnName, s.count, s.uniqueCount,
                        s.mostFrequent != null ? s.mostFrequent : "N/A",
                        s.mostFrequentCount, s.missing);
            }
            System.out.println();

            System.out.println("CATEGORICAL COLUMNS — TOP VALUE FREQUENCIES");
            System.out.println(sep);
            for (CategoricalStats s : r.categoricalStats) {
                System.out.printf("  %s:%n", s.columnName);
                s.topFrequencies.forEach((k, v) ->
                        System.out.printf("    %-25s %d%n", k, v));
                System.out.println();
            }
        }

        System.out.println(SEP);
        System.out.println();
    }

    /** Format a double for console display (2 dp, or "N/A" for NaN/Inf). */
    private static String fmt(double v) {
        if (Double.isNaN(v))      return "N/A";
        if (Double.isInfinite(v)) return v > 0 ? "+Inf" : "-Inf";
        return String.format("%.2f", v);
    }

    // =========================================================================
    // JSON report
    // =========================================================================

    private static void saveJsonReport(AnalysisResult result) throws Exception {
        ObjectMapper mapper = new ObjectMapper();
        mapper.enable(SerializationFeature.INDENT_OUTPUT);

        Map<String, Object> report = new LinkedHashMap<>();
        report.put("analysisTimestamp",      result.analysisTimestamp);
        report.put("inputFile",              result.inputFile);
        report.put("totalRows",              result.totalRows);
        report.put("totalColumns",           result.totalColumns);
        report.put("numericColumns",         result.numericColumnCount);
        report.put("categoricalColumns",     result.categoricalColumnCount);

        Map<String, Object> columns = new LinkedHashMap<>();

        for (NumericStats s : result.numericStats) {
            Map<String, Object> col = new LinkedHashMap<>();
            col.put("type",         "NUMERIC");
            col.put("count",        s.count);
            col.put("missing",      s.missing);
            col.put("mean",         safe(s.mean));
            col.put("median",       safe(s.median));
            col.put("stdDev",       safe(s.stdDev));
            col.put("variance",     safe(s.variance));
            col.put("min",          safe(s.min));
            col.put("max",          safe(s.max));
            col.put("p25",          safe(s.p25));
            col.put("p50",          safe(s.p50));
            col.put("p75",          safe(s.p75));
            col.put("iqr",          safe(s.iqr));
            col.put("lowerFence",   safe(s.lowerFence));
            col.put("upperFence",   safe(s.upperFence));
            col.put("outlierCount", s.outlierCount);
            col.put("outliers",     s.outliers.stream()
                    .map(CsvStatisticalAnalyzer::safe)
                    .collect(Collectors.toList()));
            columns.put(s.columnName, col);
        }

        for (CategoricalStats s : result.categoricalStats) {
            Map<String, Object> col = new LinkedHashMap<>();
            col.put("type",               "CATEGORICAL");
            col.put("count",              s.count);
            col.put("missing",            s.missing);
            col.put("uniqueCount",        s.uniqueCount);
            col.put("mostFrequent",       s.mostFrequent);
            col.put("mostFrequentCount",  s.mostFrequentCount);
            col.put("topFrequencies",     s.topFrequencies);
            columns.put(s.columnName, col);
        }

        report.put("columns", columns);
        mapper.writeValue(new File(OUTPUT_JSON), report);
    }

    /**
     * Convert a double to a JSON-safe Object.
     * NaN / Infinity become null; finite values are rounded to 6 dp.
     */
    private static Object safe(double v) {
        if (Double.isNaN(v) || Double.isInfinite(v)) return null;
        return Math.round(v * 1_000_000.0) / 1_000_000.0;
    }

    // =========================================================================
    // Sample CSV generator
    // =========================================================================

    private static String generateSampleCsv() throws Exception {
        Random rng = new Random(42);

        String[] departments = {"Engineering", "Marketing", "Sales", "HR", "Finance"};
        String[] cities      = {
            "New York", "London", "Berlin", "Tokyo", "Sydney",
            "Paris",    "Toronto", "Portland, OR", "Austin, TX"
        };

        List<String[]> rows = new ArrayList<>();
        rows.add(new String[]{"age", "salary", "score", "height_cm",
                              "weight_kg", "department", "city"});

        for (int i = 0; i < 200; i++) {
            // Randomly missing values
            String age     = rng.nextDouble() < 0.05 ? ""
                    : String.valueOf(18 + rng.nextInt(48));
            String salary  = rng.nextDouble() < 0.03 ? ""
                    : String.format("%.2f", 30_000 + rng.nextDouble() * 170_000);
            String score   = rng.nextDouble() < 0.04 ? ""
                    : String.format("%.1f", rng.nextDouble() * 100);
            String height  = rng.nextDouble() < 0.02 ? ""
                    : String.format("%.1f", 150 + rng.nextDouble() * 50);
            String weight  = rng.nextDouble() < 0.06 ? ""
                    : String.format("%.1f", 50 + rng.nextDouble() * 70);
            String dept    = departments[rng.nextInt(departments.length)];
            String city    = cities[rng.nextInt(cities.length)];

            // Inject obvious outliers for testing the IQR detector
            if (i == 10)  age    = "130";          // extreme outlier
            if (i == 50)  salary = "4500000.00";   // extreme outlier
            if (i == 100) score  = "155.0";         // extreme outlier
            if (i == 150) weight = "310.0";         // extreme outlier

            // Row 199: simulate all numeric fields missing
            if (i == 199) {
                rows.add(new String[]{"", "", "", "", "", dept, city});
                continue;
            }

            rows.add(new String[]{age, salary, score, height, weight, dept, city});
        }

        // Extra rows with quoted commas already in the cities array above
        // ("Portland, OR" and "Austin, TX") — Apache Commons CSV will quote them.

        CSVFormat outFmt = CSVFormat.DEFAULT.builder().build();
        try (Writer writer = new FileWriter(SAMPLE_CSV);
             CSVPrinter printer = new CSVPrinter(writer, outFmt)) {
            for (String[] row : rows) {
                printer.printRecord((Object[]) row);
            }
        }

        return SAMPLE_CSV;
    }
}